4 research outputs found

    Phylogeny of Species, Infraspecific Taxa, and Forms in Iris Subgenus Xiphium (Iridaceae), From the Mediterranean Basin Biodiversity Hotspot

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    Iris subgenus Xiphium is a small group of taxa that occur in the Mediterranean Basin, a long-recognized biodiversity hotspot. Phylogenetic relationships among these Iris were reconstructed based on sequence data from 110 nuclear markers (coding regions) and plastomes using Bayesian inference and maximum likelihood methods. Best trees based on plastome and combined datasets resolved Iris subgenus Xiphium and I. xiphium as not monophyletic while nuclear and all-gene (combined nuclear and plastid coding regions) datasets resolved the subgenus as monophyletic but I. xiphium as not monophyletic. Topology tests indicated the alternative hypothesis of a monophyletic subgenus is not rejected by the combined dataset while a monophyletic I. xiphium is rejected. Topology tests also showed the hypothesis of a polyphyletic subgenus is rejected by the nuclear and all-gene datasets, however, a monophyletic I. xiphium is not rejected by these two datasets. We hypothesize that the subgenus is monophyletic based on these analyses, morphology, and biogeography, and that uneven patterns of missing data is a likely reason for topological incongruence among datasets. A previously suggested informal group within the subgenus was supported. Patterns of relationships among species suggest multiple exchanges between the African and European continents but also the importance of the Strait of Gibraltar as a barrier to genetic exchange

    CXCL14 Promotes a Robust Brain Tumor-Associated Immune Response in Glioma.

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    PurposeThe immunosuppressive tumor microenvironment present in the majority of diffuse glioma limits therapeutic response to immunotherapy. As the determinants of the glioma-associated immune response are relatively poorly understood, the study of glioma with more robust tumor-associated immune responses may be particularly useful to identify novel immunomodulatory factors that can promote T-cell effector function in glioma.Experimental designWe used multiplex immune-profiling, proteomic profiling, and gene expression analysis to define the tumor-associated immune response in two molecular subtypes of glioma and identify factors that may modulate this response. We then used patient-derived glioma cultures and an immunocompetent murine model for malignant glioma to analyze the ability of tumor-intrinsic factors to promote a CD8+ T-cell response.ResultsAs compared with isocitrate dehydrogenase (IDH)-mutant astrocytoma, MAPK-activated pleomorphic xanthoastrocytoma (PXA) harbored increased numbers of activated cytotoxic CD8+ T cells and Iba1+ microglia/macrophages, increased MHC class I expression, enrichment of genes associated with antigen presentation and processing, and increased tumor cell secretion of the chemokine CXCL14. CXCL14 promoted activated CD8+ T-cell chemotaxis in vitro, recruited tumor-infiltrating CD8+ T cells in vivo, and prolonged overall survival in a cytotoxic T-cell-dependent manner. The immunomodulatory molecule B7-H3 was also highly expressed in PXA.ConclusionsWe identify the MAPK-activated lower grade astrocytoma PXA as having an immune-rich tumor microenvironment and suggest this tumor may be particularly vulnerable to immunotherapeutic modulation. We also identify CXCL14 as an important determinant of the glioma-associated immune microenvironment, sufficient to promote an antitumor CD8+ T-cell response
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